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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">cardiotomsk</journal-id><journal-title-group><journal-title xml:lang="ru">Сибирский журнал клинической и экспериментальной медицины</journal-title><trans-title-group xml:lang="en"><trans-title>Siberian Journal of Clinical and Experimental Medicine</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">2713-2927</issn><issn pub-type="epub">2713-265X</issn><publisher><publisher-name>TSU publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.29001/2073-8552-2022-37-4-114-123</article-id><article-id custom-type="elpub" pub-id-type="custom">cardiotomsk-1625</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>КЛИНИЧЕСКИЕ ИССЛЕДОВАНИЯ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>CLINICAL STUDIES</subject></subj-group></article-categories><title-group><article-title>Автоматический анализ поражения легких при COVID-19: сравнение стандартной и низкодозной компьютерной томографии</article-title><trans-title-group xml:lang="en"><trans-title>Automated analysis of lung lesions in COVID-19: comparison of standard and low-dose CT</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-2681-9378</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Блохин</surname><given-names>И. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Blokhin</surname><given-names>I. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Блохин Иван Андреевич, младший научный сотрудник, сектор исследований в лучевой диагностике</p><p>127051, Москва, ул. Петровка, 24, стр. 1</p></bio><bio xml:lang="en"><p>Ivan A. Blokhin, Junior Research Scientist, Diagnostic Radiology Research Sector</p><p>24, p. 1, Petrovka str., Moscow, 127051</p></bio><email xlink:type="simple">i.blokhin@npcmr.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-4485-2638</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Соловьев</surname><given-names>А. В.</given-names></name><name name-style="western" xml:lang="en"><surname>Solovev</surname><given-names>A. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Соловьёв Александр Владимирович, младший научный сотрудник, отдел научных медицинских исследований</p><p>127051, Москва, ул. Петровка, 24, стр. 1</p></bio><bio xml:lang="en"><p>Alexander V. Solovev, Junior Research Scientist</p><p>24, p. 1, Petrovka str., Moscow, 127051</p></bio><email xlink:type="simple">a.solovev@npcmr.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-2990-7736</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Владзимирский</surname><given-names>A. B.</given-names></name><name name-style="western" xml:lang="en"><surname>Vladzymyrskyy</surname><given-names>A. V.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Владзимирский Антон Вячеславович, доктор медицинских наук, заместитель директора по научной работе</p><p>127051, Москва, ул. Петровка, 24, стр. 1</p></bio><bio xml:lang="en"><p>Anton V. Vladzymyrskyy, Dr. Sci. (Med.), Deputy Director for Research</p><p>24, p. 1, Petrovka str., Moscow, 127051</p></bio><email xlink:type="simple">a.vladzimirsky@npcmr.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-0166-3768</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Коденко</surname><given-names>М. Р.</given-names></name><name name-style="western" xml:lang="en"><surname>Kodenko</surname><given-names>M. R.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Коденко Мария Романовна, младший научный сотрудник, отдел научных медицинских исследований</p><p>127051, Москва, ул. Петровка, 24, стр. 1</p></bio><bio xml:lang="en"><p>Maria R. Kodenko, Junior Research Scientist, Medical Research Department, Clinical Research and Practical Center for Diagnostics and Telemedicine Technologies of the Moscow Health Department; Bauman Moscow State Technical University</p><p>24, p. 1, Petrovka str., Moscow, 127051; 5, 2nd Baumanskaya str., bldg. 1, Moscow,105005</p></bio><email xlink:type="simple">m.kodenko@npcmr.ru</email><xref ref-type="aff" rid="aff-2"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0002-8521-4045</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Шумская</surname><given-names>Ю. Ф.</given-names></name><name name-style="western" xml:lang="en"><surname>Shumskaya</surname><given-names>Yu. F.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Шумская Юлия Федоровна, младший научный сотрудник, отделнаучных медицинских исследований, Научно-практический клинический центр диагностики и телемедицинских технологий; лаборант, кафедра госпитальной терапии № 1; Институтклинической медицины имени Н.В. Склифосовского, СеченовскийУниверситет</p><p>127051, Москва, ул. Петровка, 24, стр. 1; 119991, Москва, ул. Трубецкая, 8, стр. 2</p><p> </p></bio><bio xml:lang="en"><p>Yuliya F. Shumskaya, Junior Research Scientist, Medical Research Department, Clinical Research and Practical Center for Diagnostics and Telemedicine Technologies of the Moscow Health Department; Laboratory Technician, Department of Hospital Therapy No. 1, I.M. Sechenov First Moscow State Medical University (Sechenov University)</p><p>24, p. 1, Petrovka str., Moscow, 127051; 8, Trubetskaya str., p. 2, Moscow, 119991</p></bio><email xlink:type="simple">ShumskayaYF@zdrav.mos.ru</email><xref ref-type="aff" rid="aff-3"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0001-5161-6540</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Гончар</surname><given-names>А. П.</given-names></name><name name-style="western" xml:lang="en"><surname>Gonchar</surname><given-names>A. P.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Гончар Анна Павловна, младший научный сотрудник, сектор исследований в лучевой диагностике</p><p>127051, Москва, ул. Петровка, 24, стр. 1</p></bio><bio xml:lang="en"><p>Anna P. Gonchar, Junior Research Scientist, Medical Research Department</p><p>24, p. 1, Petrovka str., Moscow, 127051</p></bio><email xlink:type="simple">a.gonchar@npcmr.ru</email><xref ref-type="aff" rid="aff-1"/></contrib><contrib contrib-type="author" corresp="yes"><contrib-id contrib-id-type="orcid">https://orcid.org/0000-0003-1816-1315</contrib-id><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Гомболевский</surname><given-names>В. А.</given-names></name><name name-style="western" xml:lang="en"><surname>Gombolevskiy</surname><given-names>V. A.</given-names></name></name-alternatives><bio xml:lang="ru"><p>Гомболевский Виктор Александрович, кандидат медицинских наук, директор ключевых исследовательских программ</p><p>105064, Москва, p. 19, Нижний Сусальный пер., 5</p></bio><bio xml:lang="en"><p>Victor A. Gombolevskiy, M.D., Ph.D., MPH, Head of Key Research Programs</p><p>5, 2nd Baumanskaya str., bldg. 1, Moscow,105005</p></bio><email xlink:type="simple">g_victor@mail.ru</email><xref ref-type="aff" rid="aff-4"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru"><institution>Научно-практический клинический центр диагностики и телемедицинских технологий Департамента здравоохранения города Москвы</institution><country>Россия</country></aff><aff xml:lang="en"><institution>Clinical Research and Practical Center for Diagnostics and Telemedicine Technologies of the Moscow Health Department</institution><country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-2"><aff xml:lang="ru"><institution>Научно-практический клинический центр диагностики и телемедицинских технологий Департамента здравоохранения города Москвы; &#13;
Московский государственный технический университет имени Н.Э. Баумана (национальный исследовательский университет)</institution><country>Россия</country></aff><aff xml:lang="en"><institution>Clinical Research and Practical Center for Diagnostics and Telemedicine Technologies of the Moscow Health Department; Bauman Moscow State Technical University</institution><country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-3"><aff xml:lang="ru"><institution>Научно-практический клинический центр диагностики и телемедицинских технологий Департамента здравоохранения города Москвы; &#13;
Первый Московский государственный медицинский университет имени И.М. Сеченова Министерства здравоохранения Российской Федерации (Сеченовский Университет)</institution><country>Россия</country></aff><aff xml:lang="en"><institution>Clinical Research and Practical Center for Diagnostics and Telemedicine Technologies of the Moscow Health Department; &#13;
I.M. Sechenov First Moscow State Medical University (Sechenov University)</institution><country>Russian Federation</country></aff></aff-alternatives><aff-alternatives id="aff-4"><aff xml:lang="ru"><institution>Институт искусственного интеллекта</institution><country>Россия</country></aff><aff xml:lang="en"><institution>Artificial Intelligence Research Institute</institution><country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2022</year></pub-date><pub-date pub-type="epub"><day>17</day><month>01</month><year>2023</year></pub-date><volume>37</volume><issue>4</issue><fpage>114</fpage><lpage>123</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Блохин И.А., Соловьев А.В., Владзимирский A.B., Коденко М.Р., Шумская Ю.Ф., Гончар А.П., Гомболевский В.А., 2023</copyright-statement><copyright-year>2023</copyright-year><copyright-holder xml:lang="ru">Блохин И.А., Соловьев А.В., Владзимирский A.B., Коденко М.Р., Шумская Ю.Ф., Гончар А.П., Гомболевский В.А.</copyright-holder><copyright-holder xml:lang="en">Blokhin I.A., Solovev A.V., Vladzymyrskyy A.V., Kodenko M.R., Shumskaya Y.F., Gonchar A.P., Gombolevskiy V.A.</copyright-holder><license xml:lang="ru" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>Данная работа распространяется под лицензией Creative Commons Attribution 4.0.</license-p></license><license xml:lang="en" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://www.sibjcem.ru/jour/article/view/1625">https://www.sibjcem.ru/jour/article/view/1625</self-uri><abstract><sec><title>Введение</title><p>Введение. В определении степени поражения легочной паренхимы при COVID-19 особую роль играет метод компьютерной томографии (КТ) органов грудной клетки (ОГК). При этом субъективность оценки объема поражения легких по шкале КТ 0–4 при COVID-19 и постепенное внедрение низкодозной КТ (НДКТ) требуют изучения точности полуавтоматической сегментации легких при НДКТ по сравнению с КТ.</p></sec><sec><title>Цель исследования</title><p>Цель исследования: сравнить точность расчета объема пораженной легочной ткани между КТ и НДКТ при COVID-19 с помощью полуавтоматической программы сегментации.</p></sec><sec><title>Материал и методы</title><p>Материал и методы. Ретроспективное исследование выполнено на данных ранее проведенного проспективного многоцентрового исследования, зарегистрированного на ClinicalTrials.gov, NCT04379531. Данные КТ и НДКТ обработаны в программе 3D Slicer с расширениями Lung CT Segmenter и Lung CT Analyzer, пороговым методом определены объем легких и объем пораженной легочной ткани.</p></sec><sec><title>Результаты</title><p>Результаты. Выборка 84 пациента с признаками COVID-19-ассоциированной пневмонии. Средний возраст составил 50,6 ± 13,3 лет, медиана индекса массы тела – 28,15 кг/м2 [24,85; 31,31]. Для стандартного протокола КТ эффективная доза составила 10,1 ± 3,26 мЗв, для разработанного протокола НДКТ – 2,64 мЗв [1,99; 3,67]. При анализе абсолютных значений объема поражения легочной ткани в кубических сантиметрах между КТ и НДКТ с помощью критерия Вилкоксона выявлены статистически значимые различия (p-value &lt; 0,001). При анализе процента поражения легочной ткани (объем пораженной ткани/объем легких) между КТ и НДКТ критерий Вилкоксона статистически значимых различий не выявил (p-value = 0,95).</p></sec><sec><title>Заключение</title><p>Заключение. Надежность разработанного протокола НДКТ для пациентов с COVID-19 при полуавтоматическом расчете процента пораженной ткани в 3D Slicer с расширениями Lung CT Segmenter и Lung CT Analyzer сравнима со стандартным протоколом КТ ОГК.</p></sec></abstract><trans-abstract xml:lang="en"><sec><title>Introduction</title><p>Introduction. Chest computed tomography (CT) plays a prominent role in determining the extent of pulmonary parenchymal lesions in COVID-19. At the same time, subjectivity of lung lesion volume assessment using 0-4 CT scale in COVID-19 and gradual introduction of low-dose CT (LDCT) requires an investigation of semi-automated lung segmentation accuracy in LDCT compared to CT.</p></sec><sec><title>Study Objective</title><p>Study Objective. To compare the accuracy of affected lung tissue volume calculation between CT and LDCT in COVID-19 using a semi-automatic segmentation program.</p></sec><sec><title>Material and Methods</title><p>Material and Methods. The retrospective study was performed on data from the earlier prospective multicenter study registered at ClinicalTrials.gov, NCT04379531. CT and LDCT data were processed in 3D Slicer software with Lung CT Segmenter and Lung CT Analyzer extensions, and the volume of affected lung tissue and lung volume were determined by thresholding.</p></sec><sec><title>Results</title><p>Results. The sample size was 84 patients with signs of COVID-19-associated pneumonia. Mean age was 50.6 ± 13.3 years, and the median body mass index (BMI) was 28.15 [24.85; 31.31] kg/m2. The effective doses were 10.1 ± 3.26 mSv for the standard CT protocol and 2.64 mSv [1.99; 3.67] for the developed LDCT protocol. The analysis of absolute lung lesion volume in cubic centimeters with Wilcoxon Signed Ranks Test revealed a statistically significant difference between CT and LDCT (p-value &lt; 0.001). No statistically significant differences were found in the relative values of lung tissue lesion volume (lesion volume/lung volume) between CT and LDCT using Wilcoxon Signed Ranks Test (p-value = 0.95).</p></sec><sec><title>Conclusion</title><p>Conclusion. The reliability of developed LDCT protocol in COVID-19 for the semi-automated calculation of affected tissue percentage was comparable to the standard chest CT protocol when using 3D Slicer with Lung CT Segmenter and Lung CT Analyzer extensions.</p></sec></trans-abstract><kwd-group xml:lang="ru"><kwd>компьютерная томография</kwd><kwd>COVID-19</kwd><kwd>грудная клетка</kwd><kwd>полуавтоматическая сегментация</kwd><kwd>низкодозная компьютерная томография</kwd></kwd-group><kwd-group xml:lang="en"><kwd>computed tomography</kwd><kwd>COVID-19</kwd><kwd>thorax</kwd><kwd>semi-automatic segmentation</kwd><kwd>low-dose computed tomography</kwd></kwd-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Lai C.-C., Shih T.-P., Ko W.-C., Tang H.-J., Hsueh P.-R. Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and coronavirus disease-2019 (COVID-19): The epidemic and the challenges. Int. 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